STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIM36008.1Carbohydrate-binding protein SusD; Derived by automated computational analysis using gene prediction method: Protein Homology. (628 aa)    
Predicted Functional Partners:
AIM36007.1
Collagen-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.958
AIM39028.1
Collagen-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.843
AIM37036.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.775
AIM36424.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.774
AIM38797.1
Starch-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.709
AIM38798.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.701
AIM36846.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.698
AIM36333.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.687
AIM36838.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.681
AIM36494.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.671
Your Current Organism:
Sphingobacterium sp. ML3W
NCBI taxonomy Id: 1538644
Other names: S. sp. ML3W
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