STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AL01_03805Hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (350 aa)    
Predicted Functional Partners:
AL01_01980
Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
    
0.943
AL01_07015
Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.875
AL01_07050
Succinate-semialdehyde dehydrogenase; In Escherichia coli this enzyme appears to be an NAD+/NADP+-dependent succinate semialdehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.865
AL01_09305
Quinoprotein glucose dehydrogenase; catalyzes the formation of D-glucono-1,5-lactone from D-glucose and ubiquinone; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.735
AL01_08375
Pyruvate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.678
AL01_05065
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.673
AL01_02070
Glucose dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.616
AL01_04790
Threonine dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.580
AL01_02080
Glucose dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.563
AL01_07190
NADPH:quinone reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.529
Your Current Organism:
Bombella intestini
NCBI taxonomy Id: 1539051
Other names: Acetobacteraceae bacterium R-52487, B. intestini, Bombella intestini Li et al. 2015, DSM 28636, LMG 28161, LMG:28161, strain R-52487
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.