STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWR79302.1Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology. (413 aa)    
Predicted Functional Partners:
KWR88263.1
Recombinase XerC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.788
KWR87318.1
ATP-dependent DNA helicase RuvB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.722
KWR87319.1
Holliday junction ATP-dependent DNA helicase RuvA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.722
KWR87321.1
Crossover junction endodeoxyribonuclease RuvC; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.678
KWR90311.1
Excinuclease ABC subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.674
KWR90375.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.606
KWR90535.1
Excinuclease ABC subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.556
KWR90011.1
ABC-ATPase UvrA; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.556
KWR92068.1
Excinuclease ABC subunit C; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.554
KWR79303.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.551
Your Current Organism:
Cupriavidus sp. IDO
NCBI taxonomy Id: 1539142
Other names: C. sp. IDO
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.