Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADZ25523.1 | ADZ27245.1 | NAL212_0580 | NAL212_2430 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. | KEGG: atu:Atu4861 IS21 family transposase; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core. | 0.450 |
ADZ27074.1 | ADZ27245.1 | NAL212_2251 | NAL212_2430 | PFAM: Integrase, catalytic core; KEGG: swi:Swit_4958 transposase. | KEGG: atu:Atu4861 IS21 family transposase; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core. | 0.633 |
ADZ27245.1 | ADZ25523.1 | NAL212_2430 | NAL212_0580 | KEGG: atu:Atu4861 IS21 family transposase; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core. | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. | 0.450 |
ADZ27245.1 | ADZ27074.1 | NAL212_2430 | NAL212_2251 | KEGG: atu:Atu4861 IS21 family transposase; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core. | PFAM: Integrase, catalytic core; KEGG: swi:Swit_4958 transposase. | 0.633 |
ADZ27245.1 | ADZ27246.1 | NAL212_2430 | NAL212_2431 | KEGG: atu:Atu4861 IS21 family transposase; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core. | Hypothetical protein; KEGG: bpr:GBP346_A2062 hemagglutinin family protein. | 0.410 |
ADZ27245.1 | ADZ27336.1 | NAL212_2430 | NAL212_2532 | KEGG: atu:Atu4861 IS21 family transposase; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core. | PFAM: Integrase, catalytic core; KEGG: swi:Swit_4958 transposase. | 0.633 |
ADZ27245.1 | ADZ27398.1 | NAL212_2430 | NAL212_2597 | KEGG: atu:Atu4861 IS21 family transposase; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core. | PFAM: Integrase, catalytic core; KEGG: swi:Swit_4958 transposase. | 0.633 |
ADZ27246.1 | ADZ27245.1 | NAL212_2431 | NAL212_2430 | Hypothetical protein; KEGG: bpr:GBP346_A2062 hemagglutinin family protein. | KEGG: atu:Atu4861 IS21 family transposase; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core. | 0.410 |
ADZ27336.1 | ADZ27245.1 | NAL212_2532 | NAL212_2430 | PFAM: Integrase, catalytic core; KEGG: swi:Swit_4958 transposase. | KEGG: atu:Atu4861 IS21 family transposase; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core. | 0.633 |
ADZ27398.1 | ADZ27245.1 | NAL212_2597 | NAL212_2430 | PFAM: Integrase, catalytic core; KEGG: swi:Swit_4958 transposase. | KEGG: atu:Atu4861 IS21 family transposase; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core. | 0.633 |