STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ27728.1PFAM: Ribulose bisphosphate carboxylase, small chain; KEGG: nmu:Nmul_A0685 ribulose-bisphosphate carboxylase; SMART: Ribulose bisphosphate carboxylase, small chain. (144 aa)    
Predicted Functional Partners:
cbbL-2
Ribulose-bisphosphate carboxylase; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily.
 
 0.998
cbbL
Ribulose-bisphosphate carboxylase; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily.
 
 0.993
ADZ26265.1
Phosphoribulokinase; KEGG: nmu:Nmul_A0562 phosphoribulokinase; PFAM: Phosphoribulokinase/uridine kinase.
 
 
 0.966
ADZ25798.1
PFAM: Ribulose bisphosphate carboxylase, small chain; KEGG: slt:Slit_0986 ribulose-bisphosphate carboxylase; SMART: Ribulose bisphosphate carboxylase, small chain.
  
  
 
0.916
ADZ25489.1
Phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family.
    
 0.911
pgk
HAMAP: Phosphoglycerate kinase; KEGG: neu:NE0326 phosphoglycerate kinase; PFAM: Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
    
 0.907
ADZ27729.1
CbbX protein; TIGRFAM: CbxX/CfqX, monofunctional; PFAM: ATPase, AAA-type, core; KEGG: nmu:Nmul_A0684 AAA ATPase, central region; SMART: ATPase, AAA+ type, core.
 
  
 0.904
ADZ26092.1
KEGG: bja:bll4865 putative carbonic anhydrase; PFAM: Carbonic anhydrase; SMART: Carbonic anhydrase.
    
 
 0.667
ADZ25546.1
KEGG: tgr:Tgr7_0639 phosphoglycerate mutase; PFAM: Histidine phosphatase superfamily, clade-1; SMART: Histidine phosphatase superfamily, clade-1.
     
  0.499
ADZ27726.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: slt:Slit_0984 transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
     
 0.476
Your Current Organism:
Nitrosomonas sp. AL212
NCBI taxonomy Id: 153948
Other names: N. sp. AL212
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