STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORW24398.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (307 aa)    
Predicted Functional Partners:
ORW19287.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.995
ORW29744.1
Stage II sporulation protein E; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.995
ORW20276.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.969
ORW27197.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.959
ORW25807.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.948
ORW18953.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.940
ORW22785.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.901
ORW24399.1
Helix-turn-helix transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.896
ORW19554.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.873
ORW18341.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.860
Your Current Organism:
Mycobacterium palustre
NCBI taxonomy Id: 153971
Other names: ATCC BAA-377, DSM 44572, M. palustre, Mycobacterium palustre Torkko et al. 2002, strain E846
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.