STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUN41282.1SCP-like extracellular. (255 aa)    
Predicted Functional Partners:
rbsC_1
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
   
   0.858
gcdC_1
Biotin/lipoyl attachment protein.
    
  0.698
CUO36029.1
Pyruvate carboxylase.
    
  0.695
isp
Peptidase S8 and S53 subtilisin kexin sedolisin; Belongs to the peptidase S8 family.
 
  
 0.603
CUN65583.1
Fibronectin type III domain protein.
  
    0.593
CUO69796.1
Glycosyl hydrolases family 2%2C sugar binding domain protein.
  
    0.593
CUO95596.1
Glycosyl hydrolases family 2%2C sugar binding domain protein.
  
    0.593
CUP35033.1
Glycosyl hydrolases family 2%2C sugar binding domain protein.
  
    0.593
PckA
Phosphoenolpyruvate carboxykinase; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.
    
  0.583
CUO64382.1
Protein of uncharacterised function (DUF3793).
    
  0.583
Your Current Organism:
Hungatella hathewayi
NCBI taxonomy Id: 154046
Other names: CCUG 43506, Clostridium hathewayi, Clostridium hathewayi Steer et al. 2002, DSM 13479, H. hathewayi, Hungatella hathewayi (Steer et al. 2002) Kaur et al. 2014, MTCC 10951
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