STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yehU_2Integral membrane sensor signal transduction histidine kinase. (581 aa)    
Predicted Functional Partners:
CUN45209.1
AraC family transcriptional regulator.
 
  0.885
CUN45149.1
Extracellular solute-binding protein.
 
 
   0.857
yehT_6
Transcriptional regulator.
  
 
  0.798
yehT_3
LytTR family transcriptional regulator.
  
 
  0.792
yehT_5
Response regulator of the LytR/AlgR family.
  
 
  0.787
yehT_4
Response regulator of the LytR/AlgR family.
  
 
  0.762
yehT_2
LytTr family DNA-binding response regulator.
  
 
  0.759
mrkE_1
Response regulator containing CheY-like receiver and SARP domains.
  
     0.751
mrkE_2
SARP family transcriptional regulator.
  
 
  0.751
yehT_7
Two-component response regulator.
  
 
  0.700
Your Current Organism:
Hungatella hathewayi
NCBI taxonomy Id: 154046
Other names: CCUG 43506, Clostridium hathewayi, Clostridium hathewayi Steer et al. 2002, DSM 13479, H. hathewayi, Hungatella hathewayi (Steer et al. 2002) Kaur et al. 2014, MTCC 10951
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.