STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rtcB_1Release factor H-coupled RctB family protein; Belongs to the RtcB family. (499 aa)    
Predicted Functional Partners:
CUO98993.1
DNA ligase-like protein.
 
     0.565
CUO79485.1
Uncharacterised protein.
  
     0.554
CUN50059.1
Uncharacterised protein.
       0.533
kptA
RNA 2'-phosphotransferase-like protein; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase.
 
   
 0.530
CUN50470.1
Uncharacterized protein conserved in bacteria.
 
     0.526
CUO11374.1
Nucleotidyltransferase.
 
    0.525
CUN49986.1
Uncharacterised protein.
       0.515
qmcA_1
Membrane protease subunits%2C stomatin/prohibitin homologs.
 
   0.494
CUO99021.1
PolyA polymerase-like protein.
 
     0.483
CUO11352.1
Putative nucleotidyltransferase.
 
    0.461
Your Current Organism:
Hungatella hathewayi
NCBI taxonomy Id: 154046
Other names: CCUG 43506, Clostridium hathewayi, Clostridium hathewayi Steer et al. 2002, DSM 13479, H. hathewayi, Hungatella hathewayi (Steer et al. 2002) Kaur et al. 2014, MTCC 10951
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.