STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
csxA_3Glycoside hydrolase family 2. (861 aa)    
Predicted Functional Partners:
uidA_4
Beta-glucuronidase.
  
     0.668
CUP35983.1
Glycoside hydrolase family protein.
 
 
 0.668
iolS_2
Putative oxidoreductase%2C aryl-alcohol dehydrogenase like protein.
  
    0.667
bgaL_1
Beta-galactosidase.
  
     0.637
CUN79502.1
Glycoside hydrolase family protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
 0.627
CUN78286.1
Glycoside hydrolase family protein.
 
 0.614
lacC
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
   
    0.568
lacZ_1
Glycoside hydrolase.
  
  
0.566
bga_1
Beta galactosidase; Belongs to the glycosyl hydrolase 35 family.
  
 
 0.553
uxaC
Glucuronate isomerase.
  
 
 0.551
Your Current Organism:
Hungatella hathewayi
NCBI taxonomy Id: 154046
Other names: CCUG 43506, Clostridium hathewayi, Clostridium hathewayi Steer et al. 2002, DSM 13479, H. hathewayi, Hungatella hathewayi (Steer et al. 2002) Kaur et al. 2014, MTCC 10951
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