STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUN82351.1Uncharacterized protein conserved in bacteria. (390 aa)    
Predicted Functional Partners:
ypdE
Peptidase M42 family protein.
 
     0.744
yfdH_1
Family 2 glycosyl transferase.
       0.697
CUN82240.1
Uncharacterised protein.
       0.649
CUN82200.1
Conserved hypothetical integral membrane protein.
       0.594
CUN82162.1
Uncharacterised protein.
       0.533
xynA1
S-layer protein.
  
     0.469
CUO98448.1
ABC-type uncharacterized transport system%2C permease component.
  
     0.461
CUN82131.1
Predicted membrane protein.
       0.448
CUO98423.1
ABC transporter permease subunit.
  
     0.431
nylB
Beta-lactamase.
  
     0.421
Your Current Organism:
Hungatella hathewayi
NCBI taxonomy Id: 154046
Other names: CCUG 43506, Clostridium hathewayi, Clostridium hathewayi Steer et al. 2002, DSM 13479, H. hathewayi, Hungatella hathewayi (Steer et al. 2002) Kaur et al. 2014, MTCC 10951
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.