STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
caiTCholine/carnitine/betaine transporter; Belongs to the BCCT transporter (TC 2.A.15) family. (525 aa)    
Predicted Functional Partners:
gtaB
Choline/ethanolamine kinase.
 
     0.771
msrAB
methionine-R-sulfoxide reductase.
     
 0.758
csdB
Formate C-acetyltransferase; Glycine radical enzyme that catalyzes the cleavage of a C-N bond in choline, producing trimethylamine (TMA) and acetaldehyde. Belongs to the glycyl radical enzyme (GRE) family. CutC subfamily.
      
 0.629
lytB_2
Cell wall binding repeat-containing protein.
  
     0.622
toxA_5
Cell wall binding repeat-containing protein.
  
     0.622
toxA_6
Cell wall binding repeat-containing protein.
  
     0.622
lytB_3
Cell wall binding repeat-containing protein.
  
     0.589
lytA_8
Glucan-binding domain (YG repeat)-like protein.
  
     0.575
lytB_1
Putative cell wall binding repeat.
  
     0.530
CUO18975.1
Membrane-associated protein.
  
  
 0.515
Your Current Organism:
Hungatella hathewayi
NCBI taxonomy Id: 154046
Other names: CCUG 43506, Clostridium hathewayi, Clostridium hathewayi Steer et al. 2002, DSM 13479, H. hathewayi, Hungatella hathewayi (Steer et al. 2002) Kaur et al. 2014, MTCC 10951
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