STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ttgR_1Transcriptional regulator%2C TetR family. (131 aa)    
Predicted Functional Partners:
CUO04647.1
Transcriptional regulator%2C TetR family.
      0.922
CUO04585.1
FMN-binding domain-containing protein.
 
     0.830
CUO04623.1
Iron-sulfur flavoprotein.
 
     0.787
yfiR
TetR family transcriptional regulator.
  
     0.530
ttgR_2
TetR family transcriptional regulator.
  
     0.501
ppsA
Amino acid adenylation enzyme/thioester reductase family protein.
   
 
 0.481
CUO97291.1
GCN5-like N-acetyltransferase.
  
     0.478
kstR2_1
TetR family transcriptional regulator.
  
     0.463
CUO04725.1
Uncharacterised protein.
       0.458
Your Current Organism:
Hungatella hathewayi
NCBI taxonomy Id: 154046
Other names: CCUG 43506, Clostridium hathewayi, Clostridium hathewayi Steer et al. 2002, DSM 13479, H. hathewayi, Hungatella hathewayi (Steer et al. 2002) Kaur et al. 2014, MTCC 10951
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.