STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUO11401.1Oxidoreductase domain-containing protein. (377 aa)    
Predicted Functional Partners:
CUO11352.1
Putative nucleotidyltransferase.
       0.723
CUO11374.1
Nucleotidyltransferase.
       0.723
CUO11422.1
Superfamily II DNA/RNA helicases%2C SNF2 family.
   
   0.631
ycjS_2
Oxidoreductase domain-containing protein.
  
     0.568
bgaB
Beta-galactosidase.
  
 
  0.463
galK
Galactokinase; Belongs to the GHMP kinase family.
  
 0.457
lysS
lysyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.451
afr_4
Oxidoreductase domain-containing protein.
  
     0.439
CUO69711.1
Extracellular solute-binding protein.
  
     0.429
iolE_1
Sugar phosphate isomerase/epimerase.
  
 
  0.413
Your Current Organism:
Hungatella hathewayi
NCBI taxonomy Id: 154046
Other names: CCUG 43506, Clostridium hathewayi, Clostridium hathewayi Steer et al. 2002, DSM 13479, H. hathewayi, Hungatella hathewayi (Steer et al. 2002) Kaur et al. 2014, MTCC 10951
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.