STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bag_1Cell wall binding repeat-containing protein. (1910 aa)    
Predicted Functional Partners:
CUO12510.1
PpiC-type peptidyl-prolyl cis-trans isomerase.
     
 0.770
pelX
Pectate disaccharide-lyase PelX.
  
0.765
yehU_12
Integral membrane sensor signal transduction histidine kinase.
       0.644
lacE_3
Extracellular solute-binding protein.
 
     0.621
CUO12440.1
Uncharacterized protein conserved in bacteria.
 
     0.614
ppsA
Amino acid adenylation enzyme/thioester reductase family protein.
  
 
 0.584
pdtaR_1
AraC family transcriptional regulator.
       0.577
CUO42899.1
G-D-S-L family lipolytic protein.
  
 
  0.518
CUN74774.1
Uncharacterised protein.
  
 0.517
CUP29470.1
Uncharacterised protein.
  
 0.517
Your Current Organism:
Hungatella hathewayi
NCBI taxonomy Id: 154046
Other names: CCUG 43506, Clostridium hathewayi, Clostridium hathewayi Steer et al. 2002, DSM 13479, H. hathewayi, Hungatella hathewayi (Steer et al. 2002) Kaur et al. 2014, MTCC 10951
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.