STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUO32445.1Uncharacterised protein. (132 aa)    
Predicted Functional Partners:
rpoE_1
Sigma-70 family RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
 
     0.925
CUO89141.1
Protein of uncharacterised function (DUF3795).
 
     0.592
CUO32420.1
Transcription activator.
       0.576
CUO44016.1
DNA-binding transcriptional repressor ExuR.
  
     0.534
CUO55496.1
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein.
  
     0.528
rpfC_3
His Kinase A (phosphoacceptor) domain./Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase./Response regulator receiver domain.
 
     0.519
barA_8
Signal transduction histidine kinase.
  
     0.513
CUO91664.1
Membrane protein.
  
     0.439
CUP24397.1
N-acetyltransferase GCN5.
  
     0.433
cshB
DEAD/DEAH box helicase.
       0.417
Your Current Organism:
Hungatella hathewayi
NCBI taxonomy Id: 154046
Other names: CCUG 43506, Clostridium hathewayi, Clostridium hathewayi Steer et al. 2002, DSM 13479, H. hathewayi, Hungatella hathewayi (Steer et al. 2002) Kaur et al. 2014, MTCC 10951
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.