STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUO46488.1Extracellular solute-binding protein. (451 aa)    
Predicted Functional Partners:
ugpA_46
Permease component of ABC-type sugar transporter.
 
  0.914
ycjP_52
Binding-protein-dependent transport system inner membrane protein.
 
  0.834
CUO92745.1
ABC transporter substrate-binding protein.
  
     0.617
betC_9
N-acetylgalactosamine 6-sulfate sulfatase.
       0.615
glmS_2
Glucosamine--fructose-6-phosphate aminotransferase.
 
    0.600
purR_6
LacI family transcriptional regulator.
 
     0.587
CUO46717.1
Transcriptional regulator.
  
     0.583
ugpA_31
Binding-protein-dependent transport system inner membrane protein.
  
  0.569
pstA
Phosphate ABC transporter permease.
   
    0.569
CUO13029.1
OB-fold tRNA/helicase-type nucleic acid binding-protein.
  
     0.566
Your Current Organism:
Hungatella hathewayi
NCBI taxonomy Id: 154046
Other names: CCUG 43506, Clostridium hathewayi, Clostridium hathewayi Steer et al. 2002, DSM 13479, H. hathewayi, Hungatella hathewayi (Steer et al. 2002) Kaur et al. 2014, MTCC 10951
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.