STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUO52373.1Flavoprotein involved in thiazole biosynthesis. (449 aa)    
Predicted Functional Partners:
porA_1
Pyruvate ferredoxin/flavodoxin oxidoreductase.
  
 0.999
nqo1
NADH dehydrogenase (quinone).
  
 0.987
petC1
FAD dependent oxidoreductase.
  
 0.977
CUO82983.1
Iron-sulfur protein.
  
 0.922
cdr
FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Belongs to the sulfur carrier protein TusA family.
  
 0.905
nuoF2
NADH-quinone oxidoreductase subunit F 2.
  
 
 0.877
ugpA_48
Binding-protein-dependent transport system inner membrane protein.
 
     0.860
ppsA
Amino acid adenylation enzyme/thioester reductase family protein.
  
  
 0.854
accD
acetyl-CoA carboxylase%2C carboxyl transferase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.
   
  0.829
citZ
Citrate synthase; Belongs to the citrate synthase family.
  
 0.822
Your Current Organism:
Hungatella hathewayi
NCBI taxonomy Id: 154046
Other names: CCUG 43506, Clostridium hathewayi, Clostridium hathewayi Steer et al. 2002, DSM 13479, H. hathewayi, Hungatella hathewayi (Steer et al. 2002) Kaur et al. 2014, MTCC 10951
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