STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUO58003.1Uronate isomerase. (426 aa)    
Predicted Functional Partners:
purE_2
1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase.
 
  
 0.902
CUP47775.1
Asparagine synthase.
 
  
 0.897
ldh_1
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
     
 0.830
ldh_2
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
     
 0.830
CUO58042.1
Altronate hydrolase (N-terminus).
 
     0.812
CUP47747.1
Protein of uncharacterised function DUF111.
 
  
 0.799
maeB_1
Malic protein NAD-binding protein.
   
 0.790
maeB_2
Malate dehydrogenase.
   
 0.790
garD_1
Altronate hydrolase.
 
     0.762
ygbN_2
Gluconate transporter.
       0.652
Your Current Organism:
Hungatella hathewayi
NCBI taxonomy Id: 154046
Other names: CCUG 43506, Clostridium hathewayi, Clostridium hathewayi Steer et al. 2002, DSM 13479, H. hathewayi, Hungatella hathewayi (Steer et al. 2002) Kaur et al. 2014, MTCC 10951
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