STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
frpPutative NADH dehydrogenase/NAD(P)H nitroreductase. (279 aa)    
Predicted Functional Partners:
cysG_1
uroporphyrin-III C-methyltransferase.
  
 
 0.850
ppsA
Amino acid adenylation enzyme/thioester reductase family protein.
   
 
 0.722
ribF
Riboflavin biosynthesis protein RibF; Belongs to the ribF family.
    
 0.696
birA
biotin--acetyl-CoA-carboxylase ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
  
    0.679
flr_2
Flavin reductase domain-containing FMN-binding protein.
 
 0.650
CUO27520.1
ABC transporter.
  
  
 0.607
fadK
AMP-dependent ligase/synthetase.
   
 
 0.587
gloA_2
Glyoxalase/bleomycin resistance protein/dioxygenase.
  
    0.584
vatD_2
Acetyltransferase (isoleucine patch superfamily).
       0.581
cdr
FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Belongs to the sulfur carrier protein TusA family.
    
 0.531
Your Current Organism:
Hungatella hathewayi
NCBI taxonomy Id: 154046
Other names: CCUG 43506, Clostridium hathewayi, Clostridium hathewayi Steer et al. 2002, DSM 13479, H. hathewayi, Hungatella hathewayi (Steer et al. 2002) Kaur et al. 2014, MTCC 10951
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