STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
der_2Small GTP-binding protein. (402 aa)    
Predicted Functional Partners:
thiH
Biotin and thiamin synthesis associated protein.
  
 0.992
bioB_2
Radical SAM domain-containing protein.
   
 0.988
CUO65846.1
FeFe hydrogenase system regulator.
 
   
 0.940
CUO55215.1
hydrogenase%2C Fe-only.
 
   
 0.821
CUN87224.1
[Fe] hydrogenase.
 
   
 0.804
clpA
ATPases with chaperone activity%2C ATP-binding subunit; Belongs to the ClpA/ClpB family.
   
  
 0.802
gpsA
NAD-dependent glycerol-3-phosphate dehydrogenase domain-containing protein; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
  
  
 0.792
odh
Opine dehydrogenase.
  
  
 0.792
cmk
Cytidylate kinase.
  
  
 0.742
typA
GTP-binding protein TypA.
  
  
 0.733
Your Current Organism:
Hungatella hathewayi
NCBI taxonomy Id: 154046
Other names: CCUG 43506, Clostridium hathewayi, Clostridium hathewayi Steer et al. 2002, DSM 13479, H. hathewayi, Hungatella hathewayi (Steer et al. 2002) Kaur et al. 2014, MTCC 10951
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.