STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUP01426.1Uncharacterized conserved protein. (262 aa)    
Predicted Functional Partners:
CUP01353.1
Uncharacterised protein.
       0.737
afr_7
Oxidoreductase domain-containing protein.
       0.737
fabG4
3-oxoacyl-ACP reductase.
  
    0.709
CUO58926.1
Cupin.
 
    0.703
galE_3
UDP-glucose 4-epimerase.
       0.682
CUN52978.1
Putative cyclase.
  
    0.679
CUN55201.1
Cyclase.
  
    0.679
btr_1
AraC family transcriptional regulator.
  
    0.660
rbsB
Periplasmic binding protein/LacI transcriptional regulator.
       0.551
mglA_7
Sugar ABC transporter ATPase.
       0.433
Your Current Organism:
Hungatella hathewayi
NCBI taxonomy Id: 154046
Other names: CCUG 43506, Clostridium hathewayi, Clostridium hathewayi Steer et al. 2002, DSM 13479, H. hathewayi, Hungatella hathewayi (Steer et al. 2002) Kaur et al. 2014, MTCC 10951
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.