STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUP08240.1Sugar phosphate isomerase/epimerase. (295 aa)    
Predicted Functional Partners:
ulaE_2
Sugar phosphate isomerase/epimerase.
  
  
  0.881
malX_5
Carbohydrate uptake ABC transporter substrate-binding protein.
 
    0.800
ulaF_2
Class II aldolase/adducin family protein.
  
 
  0.793
fucA_3
Class II aldolase/adducin family protein.
  
 
  0.793
ulaF_3
Class II aldolase/adducin family protein.
  
 
  0.793
fruA_1
PTS system fructose subfamily transporter subunit IIC.
  
 
  0.772
hrsA_2
PTS system fructose-specific transporter subunit IIB.
  
 
  0.772
pheA
Prephenate dehydratase.
     
 0.758
yutF_2
HAD-superfamily hydrolase; Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro; Belongs to the HAD-like hydrolase superfamily. NagD family.
       0.720
vanH
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein.
 
 
  0.715
Your Current Organism:
Hungatella hathewayi
NCBI taxonomy Id: 154046
Other names: CCUG 43506, Clostridium hathewayi, Clostridium hathewayi Steer et al. 2002, DSM 13479, H. hathewayi, Hungatella hathewayi (Steer et al. 2002) Kaur et al. 2014, MTCC 10951
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