STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUP11914.1Dihydropyrimidinase. (458 aa)    
Predicted Functional Partners:
pyrB
Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
 
 0.998
carA
Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family.
  
 0.983
carB_2
Carbamoyl-phosphate synthase large subunit.
 
 0.971
carB_1
Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family.
 
 0.970
gltD_3
Selenate reductase YgfK.
 
 
 0.945
pyrD_2
Dihydroorotate dehydrogenase PyrD.
 
 0.865
pyrD_1
Dihydroorotate dehydrogenase (subfamily 1) family protein; Catalyzes the conversion of dihydroorotate to orotate.
 
 0.864
pyrDB
Dihydroorotate dehydrogenase family protein.
 
 0.861
mop
Xanthine dehydrogenase%2C molybdenum binding and iron-sulfur binding subunits.
 
  
 0.823
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
  
 
 0.818
Your Current Organism:
Hungatella hathewayi
NCBI taxonomy Id: 154046
Other names: CCUG 43506, Clostridium hathewayi, Clostridium hathewayi Steer et al. 2002, DSM 13479, H. hathewayi, Hungatella hathewayi (Steer et al. 2002) Kaur et al. 2014, MTCC 10951
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