STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gltD_3Selenate reductase YgfK. (996 aa)    
Predicted Functional Partners:
porA_1
Pyruvate ferredoxin/flavodoxin oxidoreductase.
  
 0.998
nuoF2
NADH-quinone oxidoreductase subunit F 2.
  
0.997
nqo1
NADH dehydrogenase (quinone).
 
 0.997
ppsA
Amino acid adenylation enzyme/thioester reductase family protein.
  
 0.997
mop
Xanthine dehydrogenase%2C molybdenum binding and iron-sulfur binding subunits.
 
 
 0.995
petC1
FAD dependent oxidoreductase.
  
 0.985
gltB
Glutamate synthase (ferredoxin).
 0.984
gltB1
Ferredoxin-dependent glutamate synthase GltB; Belongs to the glutamate synthase family.
  
 0.982
CUO55215.1
hydrogenase%2C Fe-only.
 
 0.973
etfB3
Electron transfer flavoprotein subunit beta.
  
 
 0.968
Your Current Organism:
Hungatella hathewayi
NCBI taxonomy Id: 154046
Other names: CCUG 43506, Clostridium hathewayi, Clostridium hathewayi Steer et al. 2002, DSM 13479, H. hathewayi, Hungatella hathewayi (Steer et al. 2002) Kaur et al. 2014, MTCC 10951
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