STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUP17393.1Zinc metallohydrolase. (338 aa)    
Predicted Functional Partners:
cdr
FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Belongs to the sulfur carrier protein TusA family.
  
 0.972
ppsA
Amino acid adenylation enzyme/thioester reductase family protein.
  
 0.908
CUP17424.1
AraC family transcriptional regulator.
       0.773
ttcA_2
Predicted ATPase of the PP-loop superfamily implicated in cell cycle control; Belongs to the TtcA family.
  
 0.599
pspE_1
Rhodanese domain-containing protein.
  
 0.599
pspE_2
Rhodanese domain-containing protein.
  
 0.599
msrAB
methionine-R-sulfoxide reductase.
   
 0.584
nroR
FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
     
 0.579
gltC_3
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
  
 0.538
yvdP
FAD linked oxidase domain-containing protein.
    
 0.523
Your Current Organism:
Hungatella hathewayi
NCBI taxonomy Id: 154046
Other names: CCUG 43506, Clostridium hathewayi, Clostridium hathewayi Steer et al. 2002, DSM 13479, H. hathewayi, Hungatella hathewayi (Steer et al. 2002) Kaur et al. 2014, MTCC 10951
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.