STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUP17599.1Polysaccharide deacetylase. (269 aa)    
Predicted Functional Partners:
yesX
FG-GAP repeat-containing protein.
    
 0.798
CUP17524.1
Uncharacterised protein.
 
  
 0.741
galM
Aldose 1-epimerase.
   
    0.692
CUN81532.1
Family 2 glycosyl transferase.
  
 
 0.689
hyaD_2
Glycosyl transferase family protein.
  
 
 0.689
yesU
Domain of uncharacterised function (DUF1961).
       0.687
lipO_11
Extracellular solute-binding protein.
 
     0.649
CUO69796.1
Glycosyl hydrolases family 2%2C sugar binding domain protein.
 
   
 0.619
ppsA
Amino acid adenylation enzyme/thioester reductase family protein.
  
  
 0.601
pgl_1
Polygalacturonase Pgl; Belongs to the glycosyl hydrolase 28 family.
  
     0.486
Your Current Organism:
Hungatella hathewayi
NCBI taxonomy Id: 154046
Other names: CCUG 43506, Clostridium hathewayi, Clostridium hathewayi Steer et al. 2002, DSM 13479, H. hathewayi, Hungatella hathewayi (Steer et al. 2002) Kaur et al. 2014, MTCC 10951
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