STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUP24638.1Uncharacterised protein. (310 aa)    
Predicted Functional Partners:
yhfW
Phosphopentomutase.
 
  
  0.853
CUP24709.1
Protein of uncharacterised function.
 
     0.843
CUP24728.1
Protein of uncharacterised function DUF2620.
 
     0.838
CUP24756.1
Methionine gamma-lyase.
 
     0.831
CUP24779.1
Alanine racemase.
 
     0.831
porA_1
Pyruvate ferredoxin/flavodoxin oxidoreductase.
    
  0.806
php_1
Aryldialkylphosphatase.
 
     0.783
php_3
Aryldialkylphosphatase.
 
     0.781
php_2
Aryldialkylphosphatase.
 
     0.775
CUP24668.1
PRD domain-containing protein.
       0.427
Your Current Organism:
Hungatella hathewayi
NCBI taxonomy Id: 154046
Other names: CCUG 43506, Clostridium hathewayi, Clostridium hathewayi Steer et al. 2002, DSM 13479, H. hathewayi, Hungatella hathewayi (Steer et al. 2002) Kaur et al. 2014, MTCC 10951
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.