STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUP39270.1Uncharacterised protein. (186 aa)    
Predicted Functional Partners:
CUP39216.1
Protein of uncharacterised function (DUF2586).
       0.811
CUP39303.1
Mu-like prophage protein gpG.
       0.807
CUP39321.1
Mu-like prophage protein gp36.
       0.807
CUP39245.1
Uncharacterised protein.
       0.792
CUP39192.1
Uncharacterised protein.
       0.786
CUP39350.1
Mu-like prophage major head subunit gpT.
       0.709
CUP39165.1
Uncharacterised protein.
       0.678
CUP39368.1
Uncharacterised protein.
       0.649
CUP39395.1
Mu-like prophage I protein.
       0.646
CUP39420.1
Phage head morphogenesis protein%2C SPP1 gp7 family.
       0.432
Your Current Organism:
Hungatella hathewayi
NCBI taxonomy Id: 154046
Other names: CCUG 43506, Clostridium hathewayi, Clostridium hathewayi Steer et al. 2002, DSM 13479, H. hathewayi, Hungatella hathewayi (Steer et al. 2002) Kaur et al. 2014, MTCC 10951
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.