STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUP41316.1Glyoxalase/bleomycin resistance protein/dioxygenase. (129 aa)    
Predicted Functional Partners:
porA_1
Pyruvate ferredoxin/flavodoxin oxidoreductase.
  
 
 0.952
trpB_1
Tryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
   
  0.822
trpB_2
Tryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
   
  0.822
gloA_1
Glyoxalase/bleomycin resistance protein/dioxygenase.
  
 
 0.808
tdcB
Threonine dehydratase.
   
 0.808
CUO59319.1
Beta-lactamase domain-containing protein.
     
 0.808
dpaL
Diaminopropionate ammonia-lyase.
   
 0.808
CUO04236.1
Beta-lactamase domain-containing protein.
     
 0.806
CUO04267.1
Beta-lactamase domain-containing protein.
     
 0.806
sdhB
L-serine ammonia-lyase; Belongs to the iron-sulfur dependent L-serine dehydratase family.
   
 
  0.799
Your Current Organism:
Hungatella hathewayi
NCBI taxonomy Id: 154046
Other names: CCUG 43506, Clostridium hathewayi, Clostridium hathewayi Steer et al. 2002, DSM 13479, H. hathewayi, Hungatella hathewayi (Steer et al. 2002) Kaur et al. 2014, MTCC 10951
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