STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ykfC_3NLP/P60 protein. (231 aa)    
Predicted Functional Partners:
guaA_1
GMP synthase.
    
  0.856
guaA_2
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.856
guaB_1
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.814
guaB_2
Inosine 5-monophosphate dehydrogenase.
    
  0.814
ygaD
Competence/damage-inducible protein CinA; Belongs to the CinA family.
    
  0.812
lytF
Peptidoglycan-binding domain-containing protein.
 
 
 0.718
atl
SH3 type 3 domain-containing protein.
  
 
 0.628
lytA_11
Cell wall binding repeat-containing protein.
  
 
 0.608
iap
NLP/P60 protein.
 
  
0.606
sleB_1
Cell wall hydrolase SleB.
 
  
 0.561
Your Current Organism:
Hungatella hathewayi
NCBI taxonomy Id: 154046
Other names: CCUG 43506, Clostridium hathewayi, Clostridium hathewayi Steer et al. 2002, DSM 13479, H. hathewayi, Hungatella hathewayi (Steer et al. 2002) Kaur et al. 2014, MTCC 10951
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.