STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gltD_5Pyridine nucleotide-disulfide oxidoreductase family protein. (803 aa)    
Predicted Functional Partners:
gltB
Glutamate synthase (ferredoxin).
 0.998
mop
Xanthine dehydrogenase%2C molybdenum binding and iron-sulfur binding subunits.
  
 0.998
coxL
Aerobic-type CO dehydrogenase large subunit.
  
 0.983
coxS
Aerobic-type carbon monoxide dehydrogenase small subunit.
  
 0.983
pyrD_1
Dihydroorotate dehydrogenase (subfamily 1) family protein; Catalyzes the conversion of dihydroorotate to orotate.
 0.981
rnfB
RnfABCDGE type electron transport complex subunit B; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
   
 0.970
nqo1
NADH dehydrogenase (quinone).
 
 
 0.970
gltB1
Ferredoxin-dependent glutamate synthase GltB; Belongs to the glutamate synthase family.
 0.968
porA_1
Pyruvate ferredoxin/flavodoxin oxidoreductase.
 
 
 0.954
ppsA
Amino acid adenylation enzyme/thioester reductase family protein.
  
 
 0.952
Your Current Organism:
Hungatella hathewayi
NCBI taxonomy Id: 154046
Other names: CCUG 43506, Clostridium hathewayi, Clostridium hathewayi Steer et al. 2002, DSM 13479, H. hathewayi, Hungatella hathewayi (Steer et al. 2002) Kaur et al. 2014, MTCC 10951
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