STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tsaBtRNA threonylcarbamoyladenosine biosynthesis protein TsaB. (200 aa)    
Predicted Functional Partners:
tsaD
tRNA N6-adenosine threonylcarbamoyltransferase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
  
 
 0.973
tsaE
tRNA threonylcarbamoyladenosine biosynthesis protein TsaE.
 
 
 0.970
AIO18336.1
Ribosomal-protein-alanine N-acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18.
  
 
 0.681
macB_2
Macrolide export ATP-binding/permease protein MacB.
  
    0.630
ytrE_2
ABC transporter ATP-binding protein YtrE.
  
    0.630
ftsE
Cell division ATP-binding protein FtsE.
  
    0.607
macB_3
Macrolide export ATP-binding/permease protein MacB; Belongs to the ABC transporter superfamily. Macrolide exporter (TC 3.A.1.122) family.
  
    0.607
inlA_1
Internalin-A precursor.
     
 0.594
AIO18334.1
Hypothetical protein.
       0.568
AIO18335.1
Hypothetical protein.
       0.568
Your Current Organism:
Izimaplasma sp. HR1
NCBI taxonomy Id: 1541959
Other names: C. Izimaplasma sp. HR1, Candidatus Izimaplasma sp. HR1, Mollicutes bacterium HR1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.