STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
srpCPutative chromate transport protein. (187 aa)    
Predicted Functional Partners:
chrA
Chromate transport protein.
 
    
0.817
AIO18544.1
Hypothetical protein.
       0.658
manP
PTS system mannose-specific EIIBCA component.
       0.658
AIO18541.1
Hypothetical protein.
       0.615
nhaP2
K(+)/H(+) antiporter NhaP2.
       0.442
AIO18538.1
ABC-2 family transporter protein.
       0.417
AIO18539.1
ABC-2 family transporter protein.
       0.417
yxlF_2
Putative ABC transporter ATP-binding protein YxlF.
       0.417
Your Current Organism:
Izimaplasma sp. HR1
NCBI taxonomy Id: 1541959
Other names: C. Izimaplasma sp. HR1, Candidatus Izimaplasma sp. HR1, Mollicutes bacterium HR1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.