STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hprHTH-type transcriptional regulator Hpr. (145 aa)    
Predicted Functional Partners:
pyrD_1
Dihydroorotate dehydrogenase.
    
 0.837
AIO18660.1
DegV domain-containing protein.
       0.752
AIO18663.1
Hypothetical protein.
  
 
 0.591
AIO18662.1
Lineage-specific thermal regulator protein.
  
  
 0.563
AIO18664.1
DegV domain-containing protein.
       0.553
pyrK_1
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit.
       0.545
gltD_2
Glutamate synthase [NADPH] small chain.
       0.545
Your Current Organism:
Izimaplasma sp. HR1
NCBI taxonomy Id: 1541959
Other names: C. Izimaplasma sp. HR1, Candidatus Izimaplasma sp. HR1, Mollicutes bacterium HR1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.