STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIO18732.1Sporulation inhibitor KapD. (293 aa)    
Predicted Functional Partners:
uvrC
UvrABC system protein C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.
       0.765
AIO18730.1
Bacterial regulatory protein, tetR family.
       0.741
AIO18867.1
Peptidase family S41.
  
     0.738
AIO18877.1
Hypothetical protein.
  
     0.701
AIO18876.1
Yip1 domain protein.
  
     0.676
AIO18873.1
Maltose ABC transporter periplasmic protein.
  
     0.662
lacR
HTH-type transcriptional regulator LacR.
       0.576
inlA_2
Internalin-A precursor.
  
     0.551
AIO19018.1
Hypothetical protein.
  
     0.525
AIO18241.1
Hypothetical protein.
  
     0.516
Your Current Organism:
Izimaplasma sp. HR1
NCBI taxonomy Id: 1541959
Other names: C. Izimaplasma sp. HR1, Candidatus Izimaplasma sp. HR1, Mollicutes bacterium HR1
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