STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIO18779.1Hypothetical protein. (216 aa)    
Predicted Functional Partners:
ndhI_1
NAD(P)H-quinone oxidoreductase subunit I, chloroplastic.
 
     0.942
korB
2-oxoglutarate oxidoreductase subunit KorB.
 
     0.925
padG
NADH-dependent phenylglyoxylate dehydrogenase subunit alpha.
 
    0.924
porC
Pyruvate synthase subunit PorC.
 
     0.913
spo0C
Chromosome-partitioning protein Spo0J; Belongs to the ParB family.
  
 
 0.756
buk2_1
Butyrate kinase 2; Belongs to the acetokinase family.
       0.739
pta_2
Phosphate acetyltransferase.
       0.738
polC_2
DNA polymerase III PolC-type.
  
    0.512
dnaA
Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
  
 
 0.490
AIO18778.1
Hypothetical protein.
       0.448
Your Current Organism:
Izimaplasma sp. HR1
NCBI taxonomy Id: 1541959
Other names: C. Izimaplasma sp. HR1, Candidatus Izimaplasma sp. HR1, Mollicutes bacterium HR1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.