STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
appCCytochrome bd-II ubiquinol oxidase subunit 1. (389 aa)    
Predicted Functional Partners:
appB
Cytochrome bd-II ubiquinol oxidase subunit 2.
 
 
 0.999
rnfA_3
Electron transport complex protein RnfA; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
     
 0.755
rnfD_3
Electron transport complex protein RnfD.
       0.752
rnfG_3
Electron transport complex protein RnfG.
       0.752
rnfE_3
Electron transport complex protein RnfE; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
       0.752
rnfB_3
Electron transport complex protein rnfB.
       0.752
msbA_4
Lipid A export ATP-binding/permease protein MsbA.
  
  
 0.675
yedZ_2
Sulfoxide reductase heme-binding subunit YedZ.
       0.631
AIO18853.1
Hypothetical protein.
       0.631
fusA_2
Elongation factor G.
       0.458
Your Current Organism:
Izimaplasma sp. HR1
NCBI taxonomy Id: 1541959
Other names: C. Izimaplasma sp. HR1, Candidatus Izimaplasma sp. HR1, Mollicutes bacterium HR1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.