STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIO18935.1Receptor family ligand binding region. (410 aa)    
Predicted Functional Partners:
AIO18932.1
Leucine/isoleucine/valine transporter permease subunit; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.999
livH
High-affinity branched-chain amino acid transport system permease protein LivH; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.997
lptB
Lipopolysaccharide export system ATP-binding protein LptB.
 
 
 0.995
livF
High-affinity branched-chain amino acid transport ATP-binding protein LivF.
 
 
 0.994
fabH_2
3-oxoacyl-[acyl-carrier-protein] synthase 3.
 
     0.901
rutD
Putative aminoacrylate hydrolase RutD.
 
     0.887
AIO18307.1
Hypothetical protein.
  
 
 0.800
cat1
Succinyl-CoA:coenzyme A transferase.
 
     0.771
ydjP
AB hydrolase superfamily protein YdjP.
 
     0.763
fadR
Fatty acid metabolism regulator protein.
 
     0.729
Your Current Organism:
Izimaplasma sp. HR1
NCBI taxonomy Id: 1541959
Other names: C. Izimaplasma sp. HR1, Candidatus Izimaplasma sp. HR1, Mollicutes bacterium HR1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.