STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIO18959.1Metallo-beta-lactamase superfamily protein. (273 aa)    
Predicted Functional Partners:
rsxB_1
Electron transport complex subunit RsxB.
 
     0.737
ndhI_2
NAD(P)H-quinone oxidoreductase subunit I, chloroplastic.
 
     0.737
AIO18958.1
Trp repressor protein.
       0.732
AIO19174.1
Hypothetical protein.
 
     0.709
AIO19175.1
Dinitrogenase iron-molybdenum cofactor.
 
     0.649
AIO18956.1
Hypothetical protein.
       0.449
sigR
ECF RNA polymerase sigma factor SigR; Belongs to the sigma-70 factor family. ECF subfamily.
       0.449
xerD_1
Tyrosine recombinase XerD; Belongs to the 'phage' integrase family.
       0.425
hin_1
DNA-invertase hin.
       0.425
AIO18463.1
Hypothetical protein.
 
     0.418
Your Current Organism:
Izimaplasma sp. HR1
NCBI taxonomy Id: 1541959
Other names: C. Izimaplasma sp. HR1, Candidatus Izimaplasma sp. HR1, Mollicutes bacterium HR1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.