STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ywpJ_2Putative phosphatase YwpJ. (270 aa)    
Predicted Functional Partners:
AIO18544.1
Hypothetical protein.
 
      0.595
ulaA_2
Ascorbate-specific permease IIC component UlaA.
       0.571
ulaC
Ascorbate-specific phosphotransferase enzyme IIA component.
  
    0.538
ulaG
Putative L-ascorbate-6-phosphate lactonase UlaG.
       0.511
ulaB_2
Ascorbate-specific phosphotransferase enzyme IIB component.
  
    0.499
polC_1
DNA polymerase III PolC-type.
      0.423
ulaF
L-ribulose-5-phosphate 4-epimerase UlaF.
  
  
 0.422
ulaE
L-ribulose-5-phosphate 3-epimerase UlaE.
       0.415
ulaD
3-keto-L-gulonate-6-phosphate decarboxylase UlaD.
       0.414
Your Current Organism:
Izimaplasma sp. HR1
NCBI taxonomy Id: 1541959
Other names: C. Izimaplasma sp. HR1, Candidatus Izimaplasma sp. HR1, Mollicutes bacterium HR1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.