STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIO19664.1Cytochrome C biogenesis protein transmembrane region. (400 aa)    
Predicted Functional Partners:
nifS
Cysteine desulfurase.
 
     0.810
AIO19665.1
Hypothetical protein.
       0.744
AIO19663.1
Hypothetical protein.
 
     0.629
AIO18557.1
2-acyl-glycerophospho-ethanolamine acyltransferase.
  
     0.602
AIO18241.1
Hypothetical protein.
 
     0.544
AIO18159.1
Hypothetical protein.
  
     0.533
macB_3
Macrolide export ATP-binding/permease protein MacB; Belongs to the ABC transporter superfamily. Macrolide exporter (TC 3.A.1.122) family.
 
    0.523
AIO19662.1
Hypothetical protein.
       0.518
zupT
Zinc transporter ZupT.
  
    0.515
copA
Copper-exporting P-type ATPase A.
 
   
 0.514
Your Current Organism:
Izimaplasma sp. HR1
NCBI taxonomy Id: 1541959
Other names: C. Izimaplasma sp. HR1, Candidatus Izimaplasma sp. HR1, Mollicutes bacterium HR1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.