STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Clow_00831Hypothetical protein. (141 aa)    
Predicted Functional Partners:
Clow_00329
Hypothetical protein.
    
   0.999
qcrB
Menaquinol-cytochrome c reductase cytochrome b subunit.
    
   0.999
aioB
Arsenite oxidase subunit AioB precursor.
  
 
   0.999
qcrC
Menaquinol-cytochrome c reductase cytochrome c subunit.
  
 
   0.999
ctaE
Cytochrome c oxidase subunit 3.
    
   0.999
ctaF
Cytochrome c oxidase polypeptide 4; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
  
 
   0.999
ctaC
Cytochrome c oxidase subunit 2 precursor.
  
 
   0.999
Clow_01566
Hypothetical protein.
    
   0.999
Clow_01798
Hypothetical protein.
  
 
   0.999
ctaD
Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
    
   0.999
Your Current Organism:
Corynebacterium lowii
NCBI taxonomy Id: 1544413
Other names: C. lowii, CCUG 65815, Corynebacterium lowii Bernard et al. 2016, Corynebacterium sp. NML 130205, Corynebacterium sp. NML 130206, LMG 28276, LMG:28276, NML 130206, strain R-50085, strain TKD4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.