Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KQB85535.1 | gndA | Cocul_00681 | Cocul_00784 | Glucose-6-phosphate dehydrogenase subunit. | 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. | 0.468 |
KQB85535.1 | pgl | Cocul_00681 | Cocul_00680 | Glucose-6-phosphate dehydrogenase subunit. | 6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate. | 0.982 |
KQB85535.1 | tal | Cocul_00681 | Cocul_00683 | Glucose-6-phosphate dehydrogenase subunit. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily. | 0.801 |
KQB85535.1 | tkt | Cocul_00681 | Cocul_00684 | Glucose-6-phosphate dehydrogenase subunit. | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | 0.732 |
KQB85535.1 | zwf | Cocul_00681 | Cocul_00682 | Glucose-6-phosphate dehydrogenase subunit. | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. | 0.958 |
gap | glkA | Cocul_00675 | Cocul_00337 | Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Glucokinase. | 0.955 |
gap | glpX | Cocul_00675 | Cocul_01744 | Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Fructose-1,6-bisphosphatase class 2. | 0.985 |
gap | pgi | Cocul_00675 | Cocul_01588 | Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.980 |
gap | pgl | Cocul_00675 | Cocul_00680 | Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate. | 0.987 |
gap | pyk | Cocul_00675 | Cocul_00417 | Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.893 |
gap | tal | Cocul_00675 | Cocul_00683 | Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily. | 0.961 |
gap | tkt | Cocul_00675 | Cocul_00684 | Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | 0.951 |
gap | zwf | Cocul_00675 | Cocul_00682 | Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. | 0.998 |
glkA | gap | Cocul_00337 | Cocul_00675 | Glucokinase. | Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.955 |
glkA | glpX | Cocul_00337 | Cocul_01744 | Glucokinase. | Fructose-1,6-bisphosphatase class 2. | 0.975 |
glkA | pgi | Cocul_00337 | Cocul_01588 | Glucokinase. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.964 |
glkA | pgl | Cocul_00337 | Cocul_00680 | Glucokinase. | 6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate. | 0.974 |
glkA | pyk | Cocul_00337 | Cocul_00417 | Glucokinase. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.423 |
glkA | tal | Cocul_00337 | Cocul_00683 | Glucokinase. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily. | 0.904 |
glkA | tkt | Cocul_00337 | Cocul_00684 | Glucokinase. | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | 0.887 |
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