STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LF95_23050Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (807 aa)    
Predicted Functional Partners:
LF95_23055
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.804
LF95_23060
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
LF95_20715
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.689
LF95_02775
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.688
LF95_10655
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.676
LF95_21300
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.671
LF95_16985
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.668
LF95_20710
RNA polymerase subunit sigma-24; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.
  
  
 0.653
LF95_16525
ECF family RNA polymerase sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.
 
  
 0.628
LF95_22855
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.625
Your Current Organism:
Thalassospira sp. TSL51
NCBI taxonomy Id: 1544451
Other names: T. sp. TSL5-1, Thalassospira sp. TSL5-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.