STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJF44616.1Ammonium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (410 aa)    
Predicted Functional Partners:
KJF44615.1
Nitrogen regulatory protein P-II; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the P(II) protein family.
 
 0.989
KJF41781.1
Nitrogen fixation protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the P(II) protein family.
 
 0.959
KJF41782.1
Nitrogen fixation protein NifHD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.916
KJF44610.1
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.728
KJF44494.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.725
KJF42602.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.691
KJF44899.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.623
KJF44614.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.535
KJF44634.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.512
KJF42514.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.512
Your Current Organism:
Draconibacterium sediminis
NCBI taxonomy Id: 1544798
Other names: D. sediminis, Draconibacterium sediminis Du et al. 2015, Draconibacterium sp. JN14CK-3, Draconibacterium sp. MCCC 1A00734, KCTC 42152, MCCC 1A00734, strain JN14CK-3
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