STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX41231.1Transcriptional regulator. (268 aa)    
Predicted Functional Partners:
SDX41299.1
TRAP-type C4-dicarboxylate transport system, small permease component.
 
     0.935
SDX41116.1
Acyl-CoA dehydrogenase.
 
  
  0.912
SDX41048.1
Uncharacterized domain 1-containing protein.
 
    0.906
SDX41083.1
Acyl-CoA dehydrogenase.
 
  
  0.900
SDX41159.1
acetyl-CoA C-acetyltransferase/acetyl-CoA acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
  0.858
SDX41332.1
TRAP-type C4-dicarboxylate transport system, substrate-binding protein.
 
     0.855
SDX41013.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
 
 
   0.853
SDX41262.1
TRAP transporter, DctM subunit.
 
  
  0.846
SDX41193.1
Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
    0.842
SDW17542.1
Indolepyruvate ferredoxin oxidoreductase.
  
  
  0.602
Your Current Organism:
Paracoccus sanguinis
NCBI taxonomy Id: 1545044
Other names: DSM 29303, LMG 28451, LMG:28451, P. sanguinis, Paracoccus sanguinis McGinnis et al. 2015, Paracoccus sp. 04681, Paracoccus sp. 05503, Paracoccus sp. 10990, Paracoccus sp. 39524, strain 05503
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