STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAPUB_7710Negative regulator of sexual conjugation and meiosis. (928 aa)    
Predicted Functional Partners:
TRAPUB_2204
5'-AMP-activated protein kinase subunit gamma.
   
 0.818
TRAPUB_1617
Protein SDS23.
   
 0.818
TRAPUB_781
WD repeat-containing protein mip1.
    
 0.775
TRAPUB_1806
AMPK1_CBM domain-containing protein.
    
 0.774
TRAPUB_8265
Uncharacterized protein.
    
 0.774
TRAPUB_8264
AMPKBI domain-containing protein.
    
 0.774
TRAPUB_11723
PB1 domain-containing protein.
   
 0.750
TRAPUB_11724
Meiotically up-regulated gene 70 protein.
   
 0.750
TRAPUB_5025
Dynein light chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in changing or maintaining the spatial distribution of cytoskeletal structures.
    
 0.728
TRAPUB_4399
Urease; In the C-terminal section; belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family.
    
 0.728
Your Current Organism:
Trametes pubescens
NCBI taxonomy Id: 154538
Other names: T. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.