STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAPUB_7293Xyloglucan-specific endo-beta-1,4-glucanase A; Belongs to the glycosyl hydrolase 12 (cellulase H) family. (283 aa)    
Predicted Functional Partners:
TRAPUB_7123
Mitotic spindle checkpoint component mad3.
   
 
 0.617
TRAPUB_12025
Checkpoint serine/threonine-protein kinase bub1.
   
 
 0.617
TRAPUB_4453
Separin.
   
 
 0.599
TRAPUB_2471
Separin.
   
 
 0.599
TRAPUB_2468
Separin.
   
 
 0.599
TRAPUB_1063
Separin.
   
 
 0.599
TRAPUB_4549
Mitotic spindle assembly checkpoint protein MAD2A.
   
 
  0.598
TRAPUB_7057
Serine/threonine-protein kinase.
   
 
  0.584
TRAPUB_2153
Serine/threonine-protein kinase PLK4.
   
 
  0.584
TRAPUB_6756
WD repeat-containing protein slp1.
   
 
 0.582
Your Current Organism:
Trametes pubescens
NCBI taxonomy Id: 154538
Other names: T. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.