TRAPUB_6928 protein (Trametes pubescens) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:

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[Homology]

Score

TRAPUB_6928

Uncharacterized protein. (194 aa)

Predicted Functional Partners:

TRAPUB_12623

0.832

TRAPUB_11000

0.777

TRAPUB_8972

0.777

TRAPUB_3312

0.725

TRAPUB_8174

0.725

TRAPUB_12969

0.724

TRAPUB_13451

0.723

TRAPUB_4829

0.722

TRAPUB_228

0.722

TRAPUB_14280

0.722

Your Current Organism:

Trametes pubescens

NCBI taxonomy Id: 154538
Other names: T. pubescens

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TRAPUB_11000	TRAPUB_6928	A0A1M2VXS6	A0A1M2V4M2	Nitrate reductase [NADH] 1.	Uncharacterized protein.	0.777
TRAPUB_11000	TRAPUB_8174	A0A1M2VXS6	A0A1M2W659	Nitrate reductase [NADH] 1.	Thioredoxin domain-containing protein 3-like protein.	0.469
TRAPUB_11000	TRAPUB_8972	A0A1M2VXS6	A0A1M2W3Y2	Nitrate reductase [NADH] 1.	Nitrate reductase [NADH] 1.	0.965
TRAPUB_12623	TRAPUB_6928	A0A1M2VTD1	A0A1M2V4M2	Uncharacterized protein.	Uncharacterized protein.	0.832
TRAPUB_12623	TRAPUB_8174	A0A1M2VTD1	A0A1M2W659	Uncharacterized protein.	Thioredoxin domain-containing protein 3-like protein.	0.500
TRAPUB_12969	TRAPUB_13451	A0A1M2VSF4	A0A1M2VR77	37S ribosomal protein S18, mitochondrial.	30S ribosomal protein S16.	0.999
TRAPUB_12969	TRAPUB_14280	A0A1M2VSF4	A0A1M2VNY2	37S ribosomal protein S18, mitochondrial.	Uncharacterized protein.	0.999
TRAPUB_12969	TRAPUB_228	A0A1M2VSF4	A0A1M2VMR2	37S ribosomal protein S18, mitochondrial.	37S ribosomal protein mrp4, mitochondrial.	0.999
TRAPUB_12969	TRAPUB_3312	A0A1M2VSF4	A0A1M2VE89	37S ribosomal protein S18, mitochondrial.	40S ribosomal protein S20.	0.993
TRAPUB_12969	TRAPUB_4829	A0A1M2VSF4	A0A1M2VAF3	37S ribosomal protein S18, mitochondrial.	Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.	0.999
TRAPUB_12969	TRAPUB_6928	A0A1M2VSF4	A0A1M2V4M2	37S ribosomal protein S18, mitochondrial.	Uncharacterized protein.	0.724
TRAPUB_12969	TRAPUB_8174	A0A1M2VSF4	A0A1M2W659	37S ribosomal protein S18, mitochondrial.	Thioredoxin domain-containing protein 3-like protein.	0.995
TRAPUB_13451	TRAPUB_12969	A0A1M2VR77	A0A1M2VSF4	30S ribosomal protein S16.	37S ribosomal protein S18, mitochondrial.	0.999
TRAPUB_13451	TRAPUB_14280	A0A1M2VR77	A0A1M2VNY2	30S ribosomal protein S16.	Uncharacterized protein.	0.999
TRAPUB_13451	TRAPUB_228	A0A1M2VR77	A0A1M2VMR2	30S ribosomal protein S16.	37S ribosomal protein mrp4, mitochondrial.	0.999
TRAPUB_13451	TRAPUB_3312	A0A1M2VR77	A0A1M2VE89	30S ribosomal protein S16.	40S ribosomal protein S20.	0.999
TRAPUB_13451	TRAPUB_4829	A0A1M2VR77	A0A1M2VAF3	30S ribosomal protein S16.	Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.	0.999
TRAPUB_13451	TRAPUB_6928	A0A1M2VR77	A0A1M2V4M2	30S ribosomal protein S16.	Uncharacterized protein.	0.723
TRAPUB_13451	TRAPUB_8174	A0A1M2VR77	A0A1M2W659	30S ribosomal protein S16.	Thioredoxin domain-containing protein 3-like protein.	0.996
TRAPUB_14280	TRAPUB_12969	A0A1M2VNY2	A0A1M2VSF4	Uncharacterized protein.	37S ribosomal protein S18, mitochondrial.	0.999